Index

A

adjust_spines() (in module bluepyefe.plottools)

analyse_threshold() (bluepyefe.extractor.Extractor method)

B

bluepyefe (module) bluepyefe.extra (module) bluepyefe.extractor (module) bluepyefe.formats (module) bluepyefe.formats.axon (module) bluepyefe.formats.csv_lccr (module)

bluepyefe.formats.ibf_json (module) bluepyefe.formats.igor (module) bluepyefe.formats.igorpy (module) bluepyefe.plottools (module) bluepyefe.tools (module) bluepyefe.tools.tools (module) boxcoxcell() (bluepyefe.extractor.Extractor method)

C

check_validity() (in module bluepyefe.formats.axon) collapse_json() (in module bluepyefe.tools.tools)

create_dataset() (bluepyefe.extractor.Extractor method) create_feature_config() (bluepyefe.extractor.Extractor method) create_metadataset() (bluepyefe.extractor.Extractor method)

D

default() (bluepyefe.tools.tools.NumpyEncoder method)

E

extract_features() (bluepyefe.extractor.Extractor method)

Extractor (class in bluepyefe.extractor)

F

feature_config_all() (bluepyefe.extractor.Extractor method)

feature_config_cells() (bluepyefe.extractor.Extractor method)

G

get_nbepisod() (in module bluepyefe.formats.axon)

get_threshold() (bluepyefe.extractor.Extractor method)

I

IgorHeader (class in bluepyefe.formats.igorpy)

L

light_palette() (in module bluepyefe.plottools)

M

main() (in module bluepyefe.extra) makedir() (in module bluepyefe.tools.tools)

makedirs() (in module bluepyefe.tools.tools) mean_features() (bluepyefe.extractor.Extractor method)

N

newmean() (bluepyefe.extractor.Extractor method) newmeancell() (bluepyefe.extractor.Extractor method)

newstd() (bluepyefe.extractor.Extractor method) newstdcell() (bluepyefe.extractor.Extractor method) NumpyEncoder (class in bluepyefe.tools.tools)

P

plt_features() (bluepyefe.extractor.Extractor method) plt_features_dist() (bluepyefe.extractor.Extractor method) plt_traces() (bluepyefe.extractor.Extractor method) print_dict() (in module bluepyefe.tools.tools)

process() (in module bluepyefe.formats.axon) (in module bluepyefe.formats.csv_lccr) (in module bluepyefe.formats.ibf_json) (in module bluepyefe.formats.igor) process_file() (bluepyefe.extractor.Extractor method)

R

read() (in module bluepyefe.formats.igorpy) read_from_binary() (in module bluepyefe.formats.igorpy)

read_from_handle() (in module bluepyefe.formats.igorpy) read_wave_notes() (in module bluepyefe.formats.igorpy)

S

sampling_rate_from_header() (in module bluepyefe.formats.axon) spikerate_drop() (in module bluepyefe.extra) spikerate_slope() (in module bluepyefe.extra) spikerate_tau_fit() (in module bluepyefe.extra)

spikerate_tau_jj() (in module bluepyefe.extra) spikerate_tau_log() (in module bluepyefe.extra) spikerate_tau_slope() (in module bluepyefe.extra) stim_feats_from_header() (in module bluepyefe.formats.axon)

T

tiled_figure() (in module bluepyefe.plottools)