bluepyefe.extract

Efeature extraction functions

Functions

compute_rheobase(cells, protocols_rheobase)	For each cell, finds the smallest current inducing a spike (rheobase).
convert_legacy_targets(targets)	Convert targets of the form:
create_feature_protocol_files(cells, protocols)	Save the efeatures and protocols for each protocol/target combo in json file.
extract_efeatures(output_directory, ...[, ...])	Extract efeatures.
extract_efeatures_at_targets(cells, targets)	Extract efeatures from recordings following the protocols, amplitudes and efeature names specified in the targets.
extract_efeatures_per_cell(files_metadata, ...)
group_efeatures(cells, targets[, ...])	Group the recordings and their efeatures and associate them to the EFeature Targets and Protocols they belong to.
plot_recordings(files_metadata[, ...])	Plots recordings.
read_recordings(files_metadata[, ...])	Read recordings from a group of files.