bluepyefe.plotting

Plotting functions

Functions

plot_all_impedances(cells, output_dir[, ...])	Plot recordings for all cells and all protocols
plot_all_recordings(cells, output_dir[, ...])	Plot recordings for all cells and all protocols
plot_all_recordings_efeatures(cells, protocols)	Generate plots for all recordings and efeatures both for individual cells and across all cells.
plot_efeature(cells, efeature, ...[, ...])	Plot one efeature for a protocol
plot_efeatures(cells, protocol_name[, ...])	Plot the efeatures of a cell or a group of cells versus current amplitude or relative current amplitude.
plot_grouped_efeatures(cells, protocols[, ...])	Generate plots for each efeature across all cells.
plot_impedance(cell, output_dir, efel_settings)	Plots the impedance.
plot_individual_efeatures(cells, protocols)	Generate efeatures plots for all each cell individually

plot_all_impedances(cells, output_dir, mapper=<class 'map'>, efel_settings=None)[source]

Plot recordings for all cells and all protocols

plot_all_recordings(cells, output_dir, show=False, mapper=<class 'map'>)[source]

Plot recordings for all cells and all protocols

plot_all_recordings_efeatures(cells, protocols, output_dir=None, show=False, mapper=<class 'map'>, efel_settings=None)[source]

Generate plots for all recordings and efeatures both for individual cells and across all cells.

plot_efeature(cells, efeature, protocol_name, output_dir, protocols=[], key_amp='amp', colors=None, markers=None, show=False, show_targets=True)[source]

Plot one efeature for a protocol

plot_efeatures(cells, protocol_name, output_dir=None, protocols=[], key_amp='amp', colors=None, markers=None, show=False, show_targets=True)[source]

Plot the efeatures of a cell or a group of cells versus current amplitude or relative current amplitude.

plot_grouped_efeatures(cells, protocols, output_dir=None, colors=None, markers=None, key_amp='amp', show=False)[source]

Generate plots for each efeature across all cells.

plot_impedance(cell, output_dir, efel_settings)[source]

Plots the impedance.

plot_individual_efeatures(cells, protocols, output_dir=None, colors=None, markers=None, key_amp='amp', show=False, mapper=<class 'map'>)[source]

Generate efeatures plots for all each cell individually